rs52731802 SNP Detail

Summary

• ID
  rs52731802
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66446803 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAGCACTG ACTGTTCTTC CAGAGGTCCT GAGTTCAATT
  CCCAGCAACC ACATGGTGGC TCACAACCAT CTGTAATGGG ATCCAATGCA CTCTTCTAGT
  K
  TGTGTCTGAA GACAGCTCCA GTGTACTCAT ATAAATAAAA ACTAAATAAA TCTTAAAAAG
  AAAAAAGAAA AGAAAGAGAA GAAGCCTCTG ACCTATGTG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147330816	ENSMUSSNP6119901	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325660092	CHEV_18_66473386	CHEVERUD	SCREENING_POP	f	SNP		T	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52731802					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66446803 () rs orientation: forward

Symbol	Name	Function Class
Gm15958	predicted gene 15958	within coordinates
Rr539712	regulatory region 539712	863 bp distal
Rr539713	regulatory region 539713	821 bp distal