rs52662223 SNP Detail

Summary

• ID
  rs52662223
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142439481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTGAGTTTA GTCACCCAGG TCACCTCTAA AGTATCAAAC
  CCCCCTCTTC AGGCCCCTGC TGTTACCTGT ACATACTTGA CATATACACA CCCCAAACTC
  T
  CTCTCTCTCT CTCTCTATCT CCCTCCCTTC CTCCCTCCCT CCCTCCCTCC CTCCCTCCCT
  ACCTCCTTCC CTCCCTCCCT CCTCCCACCT CTGTCTCAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147736722	ENSMUSSNP501595	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52662223					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142439481 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	1551 bp proximal