rs52621312 SNP Detail

Summary

• ID
  rs52621312
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13083070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACA CACACACACA CACACACACA
  M
  AATCTCAAAA AATCAAAATG CAAAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss146812810	ENSMUSSNP3552031	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss323254443	CHEV_10_12927132	CHEVERUD	SCREENING_POP	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52621312					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13083070 () rs orientation: forward

Symbol	Name	Function Class
Gm47402	predicted gene, 47402	1681 bp downstream
Phactr2	phosphatase and actin regulator 2	391 bp downstream