rs52607724 SNP Detail

Summary

• ID
  rs52607724
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189664387 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGAAAAATAC AATAAAATAA TAGTACTGTT GGGGTTGGGT
  TGGGTTGGGT CCTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTGTCTCTCT TCTCTAATTG
  G
  CCTTTTCATT TTTATTTTTA AAATAGGAGA TAGAAGAGAA CAGAAATACT AAAGGATCAG
  ACGGAATTAG GAGCGAGGCT TATGGAGGAG GAGGAAGACT G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146492803	ENSMUSSNP2501373	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52607724					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189664387 () rs orientation: forward

Symbol	Name	Function Class
Gm70902	predicted gene, 70902	within coordinates
Rr425891	regulatory region 425891	1177 bp proximal