rs52586231 SNP Detail

Summary

• ID
  rs52586231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131670003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATCTGGCTGT ATGTGTTCAG TAAAAAAAAA ATTTCTCCAG
  CAAGTTAGTT TTGGTCAGTG TTTTATAACA GCAGCAGAAG CAGCAGCAGC AGCAGCAGCA
  R
  CAACAACAAC AACAACAACA AACAACAAAA CAACCTAGGG CATTTATCTT TGTGTCTCAC
  GAAATATATC AACTTACCTC CACTATTAAT GATAAAGTCA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135907019	ENSMUSSNP923192	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52586231					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131670003 () rs orientation: forward

Symbol	Name	Function Class
Gm29865	predicted gene, 29865	within coordinates
Rr585395	regulatory region 585395	445 bp proximal
Rr585396	regulatory region 585396	1618 bp proximal