rs52584112 SNP Detail

Summary

• ID
  rs52584112
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124068955 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAACCAG CTCCTGTTTC
  CCTGGGGTTT CCAGCCGCGA TTGCAAATGC GGTTCCTGGA GCTACATTGC CCCCATGCGA
  CCGAACAGGA GAACGGCACA AAAAATGAAA CCTTTGGTTT TTGTGTTTGT TTGTTTGTTT
  GTTTGTTTTT AGATATTTTC TTTATTTACA TTTCAAATGT TTTTCCCTTT CCTGATTTCC
  M
  TTCCGAAAAT CCCTATCCCA TCCCACTCCC CTTGCTCACC TCCAAACCCA CTCCCACTTC
  CTGGCCCTGG CATTCCCCTA CACTGGGGCA TTGAGCCTTC ACAGGACCAA GGACCTCTCC
  TCCCATTGAT GACCGACTAG GCCATCCTCT GCTACATATG CAGCTGGAGC CATGGGTCCC
  TCCATGTGTG CTCTTTGGTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926860	CHEV_3_123978224	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52584112					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124068955 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	1946 bp distal
Rr584585	regulatory region 584585	28 bp distal