rs52583058 SNP Detail

Summary

• ID
  rs52583058
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86783838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCA TTTGGTGTGG GTAAACAGCA
  S
  CCCCCCTCCC CCCCCTGTGT GTGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss133359546	ENSMUSSNP4735581	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321847361	CHEV_6_86756850	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52583058					SNP	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86783838 () rs orientation: forward

Symbol	Name	Function Class
Rr633520	regulatory region 633520	within coordinates
Rr633521	regulatory region 633521	222 bp distal
Rr633522	regulatory region 633522	1385 bp proximal