rs52580025 SNP Detail

Summary

• ID
  rs52580025
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151031025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGT CACACAATAC AACACATTTA
  T
  AGTCACATAC TGACACAAGT CACAT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss136092327	ENSMUSSNP2631202	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321024993	CHEV_3_150988352	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs52580025					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151031025 () rs orientation: forward

Symbol	Name	Function Class
Rr587390	regulatory region 587390	1145 bp distal