rs52551143 SNP Detail

Summary

• ID
  rs52551143
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145449824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATAAATGAAA AAATATAATT ATCATTAATT GTCATCCTAT
  GCTATTTTTC CAGAATGTTT ACATTATTAT TTTTCTGTGA CAGATATATA TATATATATA
  T
  AGAGAGAGAG AGAGAGAGAG AGAGAGAGAC AGAGAGACAG AGAGACAGAG AGACAGAGAG
  ACAGAGAGAG AGTTTTATCC AGTTTTAAAG CATTAGCAAA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147875596	ENSMUSSNP4281872	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52551143					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145449824 () rs orientation: forward

Symbol	Name	Function Class
Rr604393	regulatory region 604393	227 bp proximal