rs52545121 SNP Detail

Summary

• ID
  rs52545121
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122210824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGTGTTTGTG GGTTTTCTTA GAGTGTTTCC TCACTTGGGT
  AGTGAGGAAC AATTGTGTGT GTTTGTGTGT GTGTGTGTGT GAGTGGTGTG TAAGACAGAG
  M
  CAGAGAGACA CAGAGACAGG GAGAGACAGA AAGAGACACA TAGTTTTAAT TGTGGCTTAG
  GTGAATACTA ACCAAAACTG ATATTACTCT TTCATTCCGT T                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135741237	ENSMUSSNP6651475	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52545121					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122210824 () rs orientation: forward

Symbol	Name	Function Class
Rr584325	regulatory region 584325	1636 bp proximal