rs52534521 SNP Detail

Summary

• ID
  rs52534521
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37713251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGAATTTAT
  ATATGTGTAT ACACACACAT ACACACACAC ACACACACAT ATATATATAT ATATATATAT
  R
  TATATATATA TATATATATG GATGATAAAT GATAACTCAG AGCATGTGGG TTAGTAGTGA
  GTGTGTAAGA GTTTAGTGGC AAGAATATAC ATTTTTCTGC T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss134810428	ENSMUSSNP2584818	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52534521					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37713251 () rs orientation: forward

Symbol	Name	Function Class
Rr575533	regulatory region 575533	1660 bp distal
Rr575534	regulatory region 575534	467 bp proximal