rs52534034 SNP Detail

Summary

• ID
  rs52534034
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56020849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTCAGGGA GCTGGAGAGA
  GGGCTCAGCT ATTCTTGAAG AGACCAGGGT TCAGTTTCCA GCACCCACAC TAAACAGGGA
  ACAACCATCT GCAACTCCAG CAGATGAGAG TAGACACCCA CTGTATCAAA TGCACAAAAC
  CCCACAGGAA CACATAATTA AAAATAATGA AAACAAAACA AAACAAAAAC CAACCACAAA
  C
  TCTTCCTACT GTGTAGCAAA TTACAAAGTT TCTCTTTGTT CCAGTGTCCT CCTACATAAG
  AATTGTTTGG TATTGGGTGA ACCGAGGACA CTTGGTGAAT GTGACAGGCC ATGACCATGA
  GTCCTCTGTA CTATGAGAAG GTGAGGACTC TATGTGATCT GTGTTTCAGG ATCCCCAGGC
  AGGTGGGCTG GGTAGGCTGT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133220295	ENSMUSSNP992189	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52534034					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56020849 () rs orientation: forward

Symbol	Name	Function Class
Rr631042	regulatory region 631042	409 bp proximal