rs52523033 SNP Detail

Summary

• ID
  rs52523033
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:63948217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAT AATAAATAAA TCTTTAAAAA
  T
  AAAATAAAAT AAAATAAAAA AAAAG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135244557	ENSMUSSNP7137166	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52523033					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:63948217 () rs orientation: forward

Symbol	Name	Function Class
Rr577614	regulatory region 577614	71 bp distal
Rr577615	regulatory region 577615	876 bp distal
Tssr29383	transcription start site region 29383	1496 bp downstream