rs52516878 SNP Detail

Summary

• ID
  rs52516878
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67396122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTCTTTGGCC TTGTCTTACT TTACTACCAC ATGGTTTATC
  CATTTCCTCA TCTATAAAGA CAGGTTACAT ACATACATAC ATACATACAT ACATACATAC
  G
  TACGTACGTA CATGCGTACA TACGTACATA CGTACATACG TACATACGTA CATACGTACA
  TACCTACATA CGTACATATG TACATACATA CATACATACG T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146469648	ENSMUSSNP7112348	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52516878					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67396122 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	within coordinates
Rr593795	regulatory region 593795	287 bp distal