rs52513902 SNP Detail

Summary

• ID
  rs52513902
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:55649455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TTTTTATTTA TAAGATTAAT TTCCATAAAA AAGTACACAG
  GAACTCTAAA TATTTGCTTA GAAAAAATTG GTAGAAAATT CTATTCCTGA AAATATATTT
  W
  AAAACACTGA AAATGTAAAA AGTCAAATTC CAAGAGATGG CCACATTGAT TTTGGTCCTT
  AGTGAGTGCT TGCATGGCCG GGGGCGGGAG GGGCTGAGAA C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss137774954	ENSMUSSNP4385148	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs52513902					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:55649455 () rs orientation: forward

Symbol	Name	Function Class
Insm2	insulinoma-associated 2	637 bp downstream
Ralgapa1	Ral GTPase activating protein, alpha subunit 1	226 bp downstream