rs52512061 SNP Detail

Summary

• ID
  rs52512061
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGGGGTG GTGGTAGAGA
  GGACAGGCTT CTATTCCACT AGGGGCTATA TGTATGTTTA TATACCTTAT CTGATTTTGA
  TTTAACTTTT GTAAGTGGTA CGTATTGAAA AATTACCCAC TTCTTTTTGT TTTCCTCATT
  TGTTGGAATA CAGGTTTTTA TAAGTATGCC CTTATGATTC TTTTGATTTC TTTGGTGTCT
  R
  TTGTTACACT TCTTTTTTTT TTATTACTAA TTTCACTAAT TTGGAAATTT TCTCTCTTTT
  TTAAATTAAA TTTGGCAAAG GTTTGTCAAT TGTATTCATT TCCTTAAAGA ACCAACTTTG
  GTTTACTTTA AAATTTTATT GAGAGAGTGA TATATATGAG GATTTAGAGA GAGGAAAGGG
  AAGGGAGAAC TGTTTTAATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134557393	ENSMUSSNP2312120	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52512061					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559331 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1598 bp distal
Rr573247	regulatory region 573247	1965 bp proximal