rs52494744 SNP Detail

Summary

• ID
  rs52494744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70009609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGAAAAA CTCACTGGTT
  GATACTGAAA CTCACAAGTG AACCCCAAAT CCATCTTTGA CCGGACGTTT AGGGTTAAGT
  AGGGGCCAGA GGTATGTACT GTTTTGTTGT TGTTTTCATA ATTTTTAACG TTTTATTTTT
  ATTTTCTGTA TATTGGTGTT TTGCCTGCAC GTGTGTCTGT GTGAGGGGGT CAGAACCCGT
  Y
  CCCTGGAACT GGAGTTACAG ACAGCTGTGA GCTGCCCTGT GGGTTCTAGG AATTGAGCCC
  AGGTCTTCTG GAAGAGTGGC CAGTACTCTT AGCCTCTGGG CCATCTCTCC AGCCCCCAGA
  GTTATTGACC CATCAATATT TTGTCCCCAT TCTGTTTTGC AGGGTGGTCT GACAACTGCA
  AATCTTGTTC CTTATAAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139676584	ENSMUSSNP4339453	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52494744					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70009609 () rs orientation: forward

Symbol	Name	Function Class
Rr494754	regulatory region 494754	1869 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Intron