rs52465701 SNP Detail

Summary

• ID
  rs52465701
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165946741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAG TATACAGATG TGTATGCATG
  Y
  ATGTGTACAT GAATGTAGTG TTGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320609531	CHEV_2_165930321	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52465701					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165946741 () rs orientation: forward

Symbol	Name	Function Class
Rr570134	regulatory region 570134	1546 bp distal
Rr570135	regulatory region 570135	913 bp proximal
Rr570136	regulatory region 570136	1823 bp proximal
Sulf2	sulfatase 2	Intron