rs52464330 SNP Detail

Summary

• ID
  rs52464330
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37843292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctccaggt caccgtggcc agctaaccta
  gcctgagttg aggccccagt gagagcccag gtcccagtga aaacaccctg cttcattaaa
  catggtggat tgtgcttggt gaaggacaca tgaagttgac ctctgacttc cacGTGCGTc
  W
  cacacacaca cacacacaca cacacacaca cacacacaca cacacacTCC ACATGGAGTA
  TGAAGTTGTG GTTGGAATTT GGTTATAGTC TTTTGGGTTC ACTATAACTT GCTCGGTATA
  TTTGGTGAAT CTCCTAACAT AAAGAGGATC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134814055	ENSMUSSNP1309485	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss320712825	CHEV_3_37688065	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52464330					SNP	T	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37843292 () rs orientation: forward

Symbol	Name	Function Class
Rr575565	regulatory region 575565	402 bp distal
Rr575566	regulatory region 575566	179 bp proximal