rs52464183 SNP Detail

Summary

• ID
  rs52464183
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37842421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGAGGAAAG AGGAAGGCGA AAAGAAGAAA AAACAGGGAT
  GAAAGGAAGA GGGAGAGATG AAGTGGGGAA GGAGGAAGGA AGAGGGAGAG GAGGAGGGAA
  G
  GAAATAGAAC GAAGTTGGGA AGTTTGGAAG GAAGGAAGAA AGGAGGAAAG AGGAAGACAG
  GGAGGAAGCA GTAAGGAAGA ACAGCGTGAG CTCTCTGCT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134814013	ENSMUSSNP2331749	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320712811	CHEV_3_37687194	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs52464183					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37842421 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	1151 bp distal
Rr575565	regulatory region 575565	79 bp proximal
Rr575566	regulatory region 575566	1050 bp proximal