rs52456064 SNP Detail

Summary

• ID
  rs52456064
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56020759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAACACA AATGTGTATC
  TGGAAAGGAG TTGTATGTTG GGACTTTATA ATGAGACTAT TAAGACATAA AGAACAACTC
  CTCCACCCTA AAGTCAGGGA GCTGGAGAGA GGGCTCAGCT ATTCTTGAAG AGACCAGGGT
  TCAGTTTCCA GCACCCACAC TAAACAGGGA ACAACCATCT GCAACTCCAG CAGATGAGAG
  T
  AGACACCCAC TGTATCAAAT GCACAAAACC CCACAGGAAC ACATAATTAA AAATAATGAA
  AACAAAACAA AACAAAAACC AACCACAAAC TCTTCCTACT GTGTAGCAAA TTACAAAGTT
  TCTCTTTGTT CCAGTGTCCT CCTACATAAG AATTGTTTGG TATTGGGTGA ACCGAGGACA
  CTTGGTGAAT GTGACAGGCC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133220292	ENSMUSSNP3646664	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52456064					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56020759 () rs orientation: forward

Symbol	Name	Function Class
Rr631042	regulatory region 631042	499 bp proximal