rs52451058 SNP Detail

Summary

• ID
  rs52451058
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:73754883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGAGAGG ATGTGCCTAG
  ACCTGCTGGG ATTGGATGTC CCAGGGTGGG GTGATACCCA AGTGGGGCTT CCCCTTCTCT
  GAGGGGGAGG GGAGGGAGCA GTGGGGTAAG GGATTTGTAA GGGTGGGACT GGAAAGAGAG
  GAGGGGATGT GATCAGGAAG TAAAGTGAAT TAAAAAAATA AAATAAATAA ATTTTAAAAG
  R
  AAGATTCATA TTTTAAACAT TTTCTTTATT TTAATCTTTG ATGTACATTG TTTTACCTGC
  ATGTATGTCT GTGTGAGGGT GTTGGATCAC CTGGAACAGA AATTAGAAAC AGTTGTAAGC
  TGCCATGTGG GTGCTGGGAA TTGAACCTGG GTCCTATGGA AGAGCAGTCA GTGCTCTTAA
  CTACTGAGCC ACTGCTCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146760170	ENSMUSSNP2446960	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs52451058					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73754883 () rs orientation: forward

Symbol	Name	Function Class
Rr559257	regulatory region 559257	588 bp proximal
Rr559258	regulatory region 559258	701 bp proximal
Rr559259	regulatory region 559259	1403 bp proximal