rs52448392 SNP Detail

Summary

• ID
  rs52448392
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17627097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACACAAG CTTTTCAAAA
  AAGACAGAAA GAAAAGAAGT CATTCTTTCT ATTCTTGGCG ATGAGTTCTC CATGCCTCTT
  TCACACTTGT GGAAAAAAAA AAGTGTCCAA GTTCGTTTTC TGCATTTGTA GCATATTTTT
  AGAAATAAAA CTAATATAGT GAATTTAAAA AAAAAGAAAA AAGTAATGTT CATGAAAATA
  A
  GGATTCGAAG AACAAAATAA AGGAAAGTTT TATATTAAAA ACATATATTT AAATTTTTAA
  ATATTAAAAA TATACTTAAA AACACTGAAT TTTTTTTTTA AATTAGTTTC CCATTGGCTG
  TTTGGTTTGC AGTGCTTATG GTGTTTATAT AGCCATTTAT TCCTTTGTTT TGCTAATTGG
  ATATACCCGA TTTGTCAATT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss133019198	ENSMUSSNP308733	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52448392					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17627097 () rs orientation: forward

Symbol	Name	Function Class
Rr626820	regulatory region 626820	1951 bp proximal