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rs52432942 SNP Detail
Summary
  • ID
    rs52432942
  • Variation Type
    SNP
  • Alleles
    G
Genome Location and Flanking Sequence
  • Location
    Chr4:148471673 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                        G AACCTGAGCC ACAGCTGGAC CACTGCTGCC CCAGTCCCAG
    TCCCAGTCCC AGTCCCAGTC CCAGACCCAG ACCCAGCACC CAGCCCCAGA CCCAGCCCCA
    G
    TCCCATTCCC ATTCCCAGCC CCAGCCCCAT TCCCAGTCCC AGTCCCAGAC CCCAGTCCCA
    GACCCAGCAC CCAGACCCAG CACCCAGACC CAGTCGCAGT C                    
    
    G = G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
DBA/2J
ss148005040 ENSMUSSNP6405714 ENSEMBL ENSEMBL_Sanger f SNP G G
SNP Consensus Information
SNP Consensus Type
A/J
DBA/2J
rs52432942 SNP G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:148471673 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr604669 regulatory region 604669 1793 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory