rs52432683 SNP Detail

Summary

• ID
  rs52432683
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150271433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT AAAATAATAA ATCTTTTTTT
  T
  AAAAAAATAA AGTGGTGCAA AAGAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321428596	CHEV_4_149561085	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52432683					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150271433 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	39 bp downstream
Rr605217	regulatory region 605217	442 bp distal
Rr605218	regulatory region 605218	235 bp distal
Tssr40380	transcription start site region 40380	440 bp upstream
Tssr40381	transcription start site region 40381	449 bp upstream
Tssr40382	transcription start site region 40382	467 bp upstream
Tssr40383	transcription start site region 40383	481 bp upstream
Tssr44720	transcription start site region 44720	414 bp downstream