rs52387158 SNP Detail

Summary

• ID
  rs52387158
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106897748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGCGAAACCC TGTCTTCAAA AACAAAAACA AAAACAAAAA
  ACAAACAAAA CAAAGCAAAA TAAAACAAAA CAACAACAAT AACAGCAAAA ACACTTATGG
  R
  GTTCTTATAA ACATAGTTCA TAGATCCCCA AAGATGGTAG ACCTTAATCA TTGGAATGAA
  ATAAGAAGTA ATTAATTTTG TTTGTCTAAG TTTTTTCTAT A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133479553	ENSMUSSNP3223442	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs52387158					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106897748 () rs orientation: forward

Symbol	Name	Function Class
Rr635980	regulatory region 635980	165 bp proximal