rs52376272 SNP Detail

Summary

• ID
  rs52376272
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31487071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTATTGG ATGGAACACA
  GGGCCCCCAA TGGAGGAGCT AGAGAAAGTA CCCAAGGAGC TGAAGGGGTC TGCAACCTTA
  TAGGTGGAAC AAAAGTATGA ACTAACCAGT AGCCCCAGAG CTCGTGTCTC TAGCTGCATA
  GGTAGCAGAA GATGGCCTAG TTGGCTATCA TTGGGAAGAG AGGCCCCTTG ATCTTGCAAA
  Y
  TTTACATGCC CCAGTACAGG GGAACACCAG GGCCAAGAAG TGGGAGTGGG TGGGTAGGGG
  AGCAGGGTGG TGGGAGGGTA TAGGGGACTT TTAGGATAGC ATTTGAAATG TAAATGATGA
  AAATATCTAA TAAAACATTG AAAAATATTT TAAGTGGCAT TTATACAAGA AAAGCAAGGG
  AGCAGAAGTG TGGCTAAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss134735723	ENSMUSSNP1141169	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52376272					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31487071 () rs orientation: forward

Symbol	Name	Function Class
Rr574910	regulatory region 574910	471 bp proximal