rs52358510 SNP Detail

Summary

• ID
  rs52358510
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18817763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACATAAT GACAACCATG
  GATAGTGATA TAATTAGCAT CCTCACAATA TCTTAACGAT GTTAAGTATC ATTATTGACA
  CATTTATGTT TGGGACATTT AATATATACT GAATCTTTTC AACAATTTCT CTTTTAAAAG
  TTTAATTTTC AAATTTTTCT CTTTCCTATA TGTGTGTGTC TGTATATGCC ATCTAAGTGC
  R
  GTGTCCTTTG AGGCCATAAG AAAGCATTGG AATCCCTAGA GCTGGAGTTA AAGGAGGTTG
  AGAGTCACCC AGTGTGGGAG CCAGCAACCA AACGTGAGTC CTCTGATGTT GTGGTTTTAA
  TGACAATGGT ATCTCTTCCT GTATGCTAAG AAAGAGATAG CTGATTTTTC CATGAGTGGG
  TGAACAGGGC GTGGGGAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133041719	ENSMUSSNP5782310	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52358510					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18817763 () rs orientation: forward

Symbol	Name	Function Class
Rr626951	regulatory region 626951	1662 bp proximal
Rr626952	regulatory region 626952	1788 bp proximal