rs52357635 SNP Detail

Summary

• ID
  rs52357635
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152048895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTATTCC AGGAAGCTCA
  CACCTTCTCA GTCTCCGCAG ACAGCCACCC ACGGCATCGA GTATTCAAAT GCCAAAGGCT
  TATGGGATAT ATCTTACTCA AACGGCCACA ATGTGTGTGT GTGTGTGTAC ACGTGTGTGT
  GTGTGCATGT GCATGCGTGT GTGCCTGCTT GAATTTCTGT GTACCGCATG CGTGCAGGAA
  Y
  CTAAGGAGGC CAGAAAAGGG CATCAAATCT CTTAGACTTG GAATTACAAG TGTTTGTGAG
  CCGCCAAGTG GCTGCTGGGA AACTAACTCA GGTCCTCTAC GGATTCTGGG AAACACTCTC
  AGCTGCTCTT CAAGAGCATC AAGTGCTCTT AATGGTTGAG GCATTTCTCT GGCCCTTCCT
  AGCTTATTTT AAAATTATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136102548	ENSMUSSNP1375580	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321028692	CHEV_3_152006222	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52357635					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152048895 () rs orientation: forward

Symbol	Name	Function Class
Rr587533	regulatory region 587533	within coordinates