rs52346418 SNP Detail

Summary

• ID
  rs52346418
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:178399781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTGTTCTGCT TCGGAAGATC AAAATCAGGA TTTTAGACTC
  TGAATAACTG CTGTTTAACA GTCCACAAAT GACTGTAAAA TGCACGCACA CACACACACA
  Y
  ACACACACAC ACACACACAC ACACATACAC ACACGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA ATTCCAGACT TTGGAAAACC ATCTCTAATC T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148370347	ENSMUSSNP2070870	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52346418					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:178399781 () rs orientation: forward

Symbol	Name	Function Class
Gm74610	predicted gene, 74610	120 bp downstream
Rr572464	regulatory region 572464	462 bp proximal
Rr572465	regulatory region 572465	557 bp proximal