rs52337483 SNP Detail

Summary

• ID
  rs52337483
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150355376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTAGATCT CTAAATTCAA
  GGCCAGCCTG ATCTACAGAT TAGAGGTATC TCAAAACACT GGTAAGTACA TTTGTTATTA
  TGTTTATTGA TTTATTAGTG AGGCATGGCT GTGGCAATTG GAGGACAGCT GGCAGCACCT
  TGTGAGCTCA GGGGGTCGAC CTCAGGTTGC TCAGCTTGGG GACAAGCATC TTTTACTTGC
  T
  GAGATGTCTA GGTAGCCCCT CCCCCGTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTG
  GTTTTCTTTT TGTTTTGTTT TTTTGAGACA GGGTTTCTCT GTATAGCTCT GGCTGTCCTG
  GAACTCACTC TGTAGACCAG GCTGGCCTCG AACTCAGAAA TCCACCTGCC TCTGCCTCCC
  AAGTGCTGGG ATCAAAGGCG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148051600	ENSMUSSNP1265704	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52337483					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150355376 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15349	CpG island 15349	1618 bp distal
Rr377418	regulatory region 377418	1618 bp downstream
Rr605260	regulatory region 605260	1989 bp distal
Rr605261	regulatory region 605261	584 bp distal
Rr605262	regulatory region 605262	1450 bp proximal