rs52332978 SNP Detail

Summary

• ID
  rs52332978
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35601340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTTGATC TCTGTTGGAG
  AGATGGCTAA GTGTTAAGAG ATGGCACTCA CCAGTCCTGC AGAGAATCCA AATTTGGTTG
  CCAGTACCTA CCTCGCAGCT TACCACCACC TATATGTAAC TTTGGTTCCA TGAGCTCCAA
  GGCTTCACAG GCATCAGGCA CACTTGTGGT GCATAGATAT CTATATCTAA CATACATTAT
  T
  TATATATCTA TACCCATATA TGCAGATACA CACACACACA CACACACACA CACACACATA
  TATATATATA TATACATACA TACATATAGA TAGATATATG TAGGCAAAAC ACCTGTATAA
  ATTCAAAAGC AATCAAGGCT GATTCCTGAG ACCTCGCTTA AGGACTCTGG ATGTGAAGAG
  CAGAGGTAAC CACTCATAAG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149139855	ENSMUSSNP2765215	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss322583860	CHEV_8_36197240	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52332978					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35601340 () rs orientation: forward

Symbol	Name	Function Class
Rpl31-ps23	ribosomal protein L31, pseudogene 23	654 bp upstream
Rr400824	regulatory region 400824	611 bp upstream
Rr662120	regulatory region 662120	669 bp proximal