rs52332976 SNP Detail

Summary

• ID
  rs52332976
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136008874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCAGCTGA TGCCCTTAAA
  GCCTAGAGAA CGCTGCTTGT TCTTGTTGTG CATTTTCAGT ACCATGGTCT ACAGTTTTTT
  GGAACCTACT TTCTTTGAGG AAGACCACCA GCAGAAGCAT TATGAGGCCA AGCTCCCCAC
  TCCTTGGGGC CTGATGCCCT CCTGCAGAGC CCGTTTGCTC TTCTCAGCCA GGCCAACCCC
  W
  GGGCCTTGCT TGTGGGACTT ACCACCAGCT TCACTGATCT GCAGGCAGAG GCAGAGACAG
  ACAGACAGAC AACAGACAGA CAGACAGGCA GGCAGGCAGG CATGCAAGGG AACATGAGAC
  AGACGCTGTC CTTGCCCTGC TTCCTCCCCT GCCACTCTTC CCTCCTGTCC TCAGAAACCC
  AAGCCCTGCT GGAATGGAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147564470	ENSMUSSNP243971	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52332976					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136008874 () rs orientation: forward

Symbol	Name	Function Class
Rr602339	regulatory region 602339	1004 bp proximal