rs52332820 SNP Detail

Summary

• ID
  rs52332820
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131670012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TATGTGTTCA GTAAAAAAAA AATTTCTCCA GCAAGTTAGT
  TTTGGTCAGT GTTTTATAAC AGCAGCAGAA GCAGCAGCAG CAGCAGCAGC AACAACAACA
  R
  CAACAACAAC AAACAACAAA ACAACCTAGG GCATTTATCT TTGTGTCTCA CGAAATATAT
  CAACTTACCT CCACTATTAA TGATAAAGTC AGACAAAACC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135907022	ENSMUSSNP386592	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52332820					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131670012 () rs orientation: forward

Symbol	Name	Function Class
Gm29865	predicted gene, 29865	within coordinates
Rr585395	regulatory region 585395	436 bp proximal
Rr585396	regulatory region 585396	1609 bp proximal