rs52332044 SNP Detail

Summary

• ID
  rs52332044
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130553928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CCCTGGAGAG TTCCTTTAAT TATTTAATTA TTTATTTGTT
  TATTTATTTT ATTATTTATT ATTATTATTA TTTAATTATT TATTTATCTT ATGTATATGA
  R
  TACACCGTAG GGCGTCGGAT CCCACTGCAG CAACCATGTG GTTGCTGGGA ATTGAACTCA
  TGACCTCTGG AAGAGCACGC TGAGCCATCT CTCCAGCCCT C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135899341	ENSMUSSNP1739878	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52332044					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130553928 () rs orientation: forward

Symbol	Name	Function Class
Gm42997	predicted gene 42997	within coordinates
Gm43522	predicted gene 43522	11 bp upstream
Gm65129	predicted gene, 65129	724 bp upstream
Rr585206	regulatory region 585206	1141 bp distal
Rr585207	regulatory region 585207	415 bp proximal
Rr585208	regulatory region 585208	646 bp proximal