rs52324200 SNP Detail

Summary

• ID
  rs52324200
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:27886640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TACTTGTCCA TTTCCTTGTC CCTTTCCCTC TTTCCCTCTT
  TCTCTCTGTC TCTGTCTCTC TCAGTCTCTG TCTCTCAGTC TCTGTCTCCC TCTATCTCTG
  T
  CTCTCTGTCT CTCTGTCTCA CTCTCTCTCT CTCTCTCTCT GCTTTGTGCT GGCAGTTCAA
  GATGTAAGCT CTCAGCCTCC TGTTCCCACT GCCATGCCTA T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133087824	ENSMUSSNP5164884	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52324200					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:27886640 () rs orientation: forward

Symbol	Name	Function Class
Grm8	glutamate receptor, metabotropic 8	Intron
Rr627332	regulatory region 627332	321 bp distal
Rr627333	regulatory region 627333	1185 bp proximal