rs52307903 SNP Detail

Summary

• ID
  rs52307903
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135495771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAAAACA AAAATAAGAG
  CCGGGAAGTG GTGGCGCACG CCTTTAAACC CAGCACATGG AAGGCAGAGG CAGGTGGATT
  TCTGAGTTCG AGGCCAGCCT GGTCTACAGA GTGAGTTCCA GGACAGCCAG GGCTACACAG
  AGAGAAATCC TGTCTCGAAA AAAACCAAAA GGGGGAAAAA AAAAAAAGCA AAACTAAAAA
  M
  AAAAACAAAA CAAAAAACCA AAACAACAAA AAAATAATAA TAAGTATATA GATAGACAGG
  CTGGCAGACA GATAGATAGA AGGAATAGAA TATCAATACA TCCCAGGAGA TTAACCATAG
  AGGCATAGGC CTGTGATTCC TGGCTTCTGG AGGCTGAGGC AGGAAGGATA CAAGTCTGAG
  ACTGATCTGG GCTACCCAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147550473	ENSMUSSNP3831396	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
ss321353139	CHEV_4_135324375	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52307903					SNP	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135495771 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Myom3	myomesin family, member 3			Intron
				Noncoding-Transcript-Variant
Rr602132	regulatory region 602132			479 bp proximal
Rr602133	regulatory region 602133			573 bp proximal
Rr602134	regulatory region 602134			894 bp proximal