rs52307064 SNP Detail

Summary

• ID
  rs52307064
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95183751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTTGAA AAGCAACAAA
  ACAAAAACAG CACTTGTTCT TGCAGAGGAC TCTAGTTTGG TTTCCAACAT CTACAGAGTG
  GCTCAAAACC ATCCCCTAAC ATCTATTTCA GAGGATCTGA CACCTTCTTT CTTTTGAGAG
  CAACAGGCAT GCATGTGATG TCCGTATATA CAGACAAGAA AAATACTCAT ACACATAAAA
  R
  AATAGGTCTA AAAAAATTTG GTTTTAGAGA AAAAGGAAGA CCATTAGTTG AAATAATATA
  TCCTGAAGTG TCTGTCTGTC TGTCTGATGG CCTGGAAGGC AGGCAAGAAG AGGGTTTAGG
  GGGGAAAAAA AAACCACTTC CCTTCTGAGG ATGACTATGG TCGATAGCTA ACAGAAAAAC
  TGGGGCCTTC GATGAAAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135510449	ENSMUSSNP6336374	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52307064					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95183751 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580883	regulatory region 580883	1776 bp distal
Rr580884	regulatory region 580884	517 bp proximal