rs52297620 SNP Detail

Summary

• ID
  rs52297620
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150154073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGGGTAAC CTCTACCATT TGAGGTCGAA CCTTAGACTG
  AAGATAGATA CCCCTCTCTT CTTTCTCTTT CTGGGTTTTT TTTTCCAGTT ATTTTTTGGG
  G
  TTTTTTTTTT TTTTTTTTTT TTTCGAGACA GGGTTTCTCT GTATAGCCCT GGCTGTCCTG
  GAGCTCACTT TGTATACCAG GCTGGCCTCG AACTCAGAA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148046754	ENSMUSSNP3003155	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52297620					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150154073 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Gm37795	predicted gene, 37795	within coordinates
Mir34a	microRNA 34a	1061 bp downstream
Rr605164	regulatory region 605164	378 bp proximal