rs52297113 SNP Detail

Summary

• ID
  rs52297113
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147509766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C GAGAATGATA CACACATGTG CATGGGGGGA GGGCGAATAT
  GATTGGGAGA ATGAATGAAT GAATGAATGA ATGAATGAAT CAGATGACTA TTGAAATAGA
  A
  AAATAAGGAC AATGACAGGA GTGGTGTGAC ACATAGCAAG AATTTCTCTT TCTCCCTCTT
  CCCCCTCCCT CCCCCCCCAG AGAGAGAGAG AGAGAGAGAG A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147958781	ENSMUSSNP6803362	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52297113					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147509766 () rs orientation: forward

Symbol	Name	Function Class
Rr604485	regulatory region 604485	689 bp proximal
Rr604486	regulatory region 604486	803 bp proximal