rs52280323 SNP Detail

Summary

• ID
  rs52280323
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149929941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGCG CGCGCGCACA CACACACAAA
  M
  ACCACTGTTT TTTTCAAAAT GTAGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148041526	ENSMUSSNP5054700	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52280323					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149929941 () rs orientation: forward

Symbol	Name	Function Class
Gm54270	predicted gene, 54270	131 bp downstream
Rr605077	regulatory region 605077	1372 bp distal
Rr605078	regulatory region 605078	17 bp distal
Rr605079	regulatory region 605079	1253 bp proximal