rs52276655 SNP Detail

Summary

• ID
  rs52276655
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142984057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAACAA AAGCATTTCC
  TCAGATTAGG CTGACGCAGA GCTATATAGT AACAGTAAAA ATAATGATAA ATAATAATAA
  TGATAACACA ACAGCAACAA AATAACCAGT TAATGGGTCT GCCTGAATCG GTGAGGGGCA
  GGCAGGAGAA TGAGAACTCC AAGGCTGGCT TCAGTTACAC AGAGAGTTCA AAGCCAGTCT
  R
  AGCTACATGA GACTCTACCA GAGAAAACAA AAAGTAAACA AACAAACAAA AATAAAACAG
  AGAAAATAAA ACAGAGAAAA GAGAAAGTGA CTTTGAGAAA GAGAGACACA GAGACAGAGA
  GGCAGAGAGA GACAGACACA GGCACAGAGA CACAGAGCAA AACAGAGAGA CAGAAAGGGA
  GAGAGGCTGA GAGTCACAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147777742	ENSMUSSNP5264071	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52276655					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142984057 () rs orientation: forward

Symbol	Name	Function Class
Rr604180	regulatory region 604180	984 bp proximal
Rr604181	regulatory region 604181	1292 bp proximal