rs52275922 SNP Detail

Summary

• ID
  rs52275922
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67396136 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTTACTTTAC TACCACATGG TTTATCCATT TCCTCATCTA
  TAAAGACAGG TTACATACAT ACATACATAC ATACATACAT ACATACGTAC GTACGTACAT
  G
  CGTACATACG TACATACGTA CATACGTACA TACGTACATA CGTACATACC TACATACGTA
  CATATGTACA TACATACATA CATACGTACG TACGTACATA T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146469659	ENSMUSSNP1568560	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52275922					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67396136 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	within coordinates
Rr593795	regulatory region 593795	301 bp distal