rs52274192 SNP Detail

Summary

• ID
  rs52274192
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104849676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTGGGAGGGG CAGAGGCAGG CGGATTTCTG AGTTTGAGGC
  CAGCCTGGTC TACAGAGTGA GTTCCAGGAC AGCCAGGGCT ACACAGAGAA ACCCTGTCTC
  C
  GGGGGGGGGG GGGGGGGAGT TGAAACTGTG GCTTGGCTTT TCTGTTTGGC CATAGTTGCT
  TACAGGGGCT GATAGTGTTG ACAAAATGGA ACCAGAATTC T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135572363	ENSMUSSNP7069468	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52274192					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104849676 () rs orientation: forward

Symbol	Name	Function Class
Gm65748	predicted gene, 65748	within coordinates
Rr582632	regulatory region 582632	1534 bp distal
Rr582633	regulatory region 582633	1290 bp distal
Rr582634	regulatory region 582634	943 bp proximal