rs52265606 SNP Detail

Summary

• ID
  rs52265606
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120869698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAT GGGATAAGGG GTTTGTAGAG
  R
  AGAAACTGGA AAAAGGGATA ACATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147376874	ENSMUSSNP5671554	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320481373	CHEV_2_120864953	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs52265606					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120869698 () rs orientation: forward

Symbol	Name	Function Class
Rr563765	regulatory region 563765	1655 bp distal
Rr563766	regulatory region 563766	367 bp proximal
Rr563767	regulatory region 563767	1975 bp proximal