rs52261672 SNP Detail

Summary

• ID
  rs52261672
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119831751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTCTATCT CTTTCTCTCT CTCTAGTTTT GTTAGCTTGC
  TTTGTGTTGT AGGTGGGATT TTGTTTTGCT TTCATTTTAG TTTTGAAGCT AGATCTTTTT
  T
  AAAGATTTAT TATTTTTAGT TATGTATATA GTAAAAGGCA GTGTATTGTT GGGCTAGAGA
  GTTGACTCAG TGGTGATGAG CGCTTGTTCT TGCAGAGAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133593614	ENSMUSSNP4184437	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52261672					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119831751 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	within coordinates
Rr637739	regulatory region 637739	186 bp distal
Rr637740	regulatory region 637740	754 bp proximal