rs52223252 SNP Detail

Summary

• ID
  rs52223252
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106789035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGGGCCAGTG AGGGGTAGCC TTGGAGGAGG GGTAGCCTTA
  CTGTGAAAGG GATGTAAAGT GAATAAATAA ATGGGGGAAA ATTACATAGT AAAAACAAAT
  A
  CAAAAAAAGA AAAACAAAAA ACAAAACAAA ACAACAACAA CAAAAGCCAG GCCTAGAGTC
  TCTTTCTTCT CTCTCTCCTC TATTTCTGCC TGCAAATCAG A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135580655	ENSMUSSNP2581882	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs52223252					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106789035 () rs orientation: forward

Symbol	Name	Function Class
Rr582871	regulatory region 582871	1427 bp distal
Rr582872	regulatory region 582872	1509 bp distal