rs52210058 SNP Detail

Summary

• ID
  rs52210058
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56020874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTATTCT TGAAGAGACC
  AGGGTTCAGT TTCCAGCACC CACACTAAAC AGGGAACAAC CATCTGCAAC TCCAGCAGAT
  GAGAGTAGAC ACCCACTGTA TCAAATGCAC AAAACCCCAC AGGAACACAT AATTAAAAAT
  AATGAAAACA AAACAAAACA AAAACCAACC ACAAACTCTT CCTACTGTGT AGCAAATTAC
  A
  AAGTTTCTCT TTGTTCCAGT GTCCTCCTAC ATAAGAATTG TTTGGTATTG GGTGAACCGA
  GGACACTTGG TGAATGTGAC AGGCCATGAC CATGAGTCCT CTGTACTATG AGAAGGTGAG
  GACTCTATGT GATCTGTGTT TCAGGATCCC CAGGCAGGTG GGCTGGGTAG GCTGTGTGTA
  AGCCTGGTGG ACACAGGTGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133220298	ENSMUSSNP5289999	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52210058					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56020874 () rs orientation: forward

Symbol	Name	Function Class
Rr631042	regulatory region 631042	384 bp proximal