rs52208573 SNP Detail

Summary

• ID
  rs52208573
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143705456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TCAGCATAGG GATCTGACAG GATTTTTAGG CTTATTTCAG
  AAGGCATAAC TTAAAAACAG TCGTCAGTCA TCAGTCCAAG TCCGAACACA AAGAGACACA
  A
  AAGACACACA CAGAAACCGT AAACCACAAA CAAAAACAAG ATAGTAACAG AGAAAAAGAA
  ACCTGACGGG GTCGGATTCT ACATCGACTC CCTTCCTCCT G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147809386	ENSMUSSNP5735524	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52208573					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143705456 () rs orientation: forward

Symbol	Name	Function Class
Gm68748	predicted gene, 68748	1444 bp upstream
Rr604212	regulatory region 604212	1182 bp distal
Rr604213	regulatory region 604213	439 bp proximal