rs52205676 SNP Detail

Summary

• ID
  rs52205676
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:86982638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCTTCTTCTT CTTCTTCTTC TTCTTCTTCT TCTTCTTCTT
  CTTCTTCTTC TTCTTCTTCT TCTTCCTCTT CTTCCTCTTC TTCTTCTTCT TCTTCTCCTC
  T
  TCCTCCTCCT CCTCCTCCTC CTCCTCCTCC TCCTCCTCTT CTTCCTTTTC CCCGCCACCC
  TCCCAGCACC TCTTTGTTGC CAAAAAATAT CTTTTGCTCT T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146926849	ENSMUSSNP634808	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs52205676					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:86982638 () rs orientation: forward

Symbol	Name	Function Class
Rr594860	regulatory region 594860	1126 bp distal
Rr594861	regulatory region 594861	949 bp proximal
Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	Intron